Mapping the interaction of cofilin with subdomain 2 on actin

Sabrina A Benchaar, Yongming Xie, Martin Phillips, Rachel R Ogorzalek Loo, Vitold E Galkin, Albina Orlova, Mario Thevis, Andras Muhlrad, Steven C Almo, Joseph A Loo, Edward H Egelman, Emil Reisler

Publication: Contribution to journalJournal articlesResearch

Abstract

Cofilin, a member of the actin-depolymerizing factor (ADF)/cofilin family of proteins, is a key regulator of actin dynamics. Cofilin binds to monomer (G-) and filamentous (F-) actin, severs the filaments, and increases their turnover rate. Electron microscopy studies suggested cofilin interactions with subdomains 2 and 1/3 on adjacent actin protomers in F-actin. To probe for the presence of a cryptic cofilin binding site in subdomain 2 in G-actin, we used transglutaminase-mediated cross-linking, which targets Gln41 in subdomain 2. The cross-linking proceeded with up to 85% efficiency with skeletal alpha-actin and WT yeast actin, yielding a single product corresponding to a 1:1 actin-cofilin complex but was strongly inhibited in Q41C yeast actin (in which Q41 was substituted with cysteine). LC-MS/MS analysis of the proteolytic fragments of this complex mapped the cross-linking to Gln41 on actin and Gly1 on recombinant yeast cofilin. The actin-cofilin (AC) heterodimer was purified on FPLC for analytical ultracentrifugation and electron microscopy analysis. Sedimentation equilibrium and velocity runs revealed oligomers of AC in G-actin buffer. In the presence of excess cofilin, the covalent AC heterodimer bound a second cofilin, forming a 2:1 cofilin/actin complex, as revealed by sedimentation results. Under polymerizing conditions the cross-linked AC formed mostly short filaments, which according to image reconstruction were similar to uncross-linked actin-cofilin filaments. Although a majority of the cross-linking occurs at Gln41, a small fraction of the AC cross-linked complex forms in the Q41C yeast actin mutant. This secondary cross-linking site was sequenced by MALDI-MS/MS as linking Gln360 in actin to Lys98 on cofilin. Overall, these results demonstrate that the region around Gln41 (subdomain 2) is involved in a weak binding of cofilin to G-actin.

Original languageEnglish
JournalClinical biochemistry
Volume46
Issue number1
Pages (from-to)225-233
Number of pages9
ISSN0006-2960
DOIs
Publication statusPublished - 09.01.2007

Research areas and keywords

  • Actin Depolymerizing Factors
  • Actins
  • Amino Acid Sequence
  • Binding Sites
  • Cross-Linking Reagents
  • Glutamine
  • Microscopy, Electron
  • Models, Molecular
  • Molecular Sequence Data
  • Protein Conformation
  • Protein Structure, Tertiary
  • Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
  • Transglutaminases
  • Ultracentrifugation
  • Yeasts

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